In the Poly(A) signal page, We identified motifs (tetramers, pentamer and hexamers) enriched within 50 nt upstream of poly(A) sites using the MEME suite. Since scAPAtrap is capable of determining the exact location of poly(A) sites by using the strategy of poly(A) read anchoring, we only used poly(A) sites identified by scAPAtrap for poly(A) signal identification. More...
Organisms
Protocols
Year
Tissues

GSE104556 Study


Mus musculus

Study: GSE104556

Protocol: 10X

Year: 2018

GSE103918 Study


Homo sapiens

Study: GSE103918

Protocol: 10X

Year: 2018

GSE105216 Study


Homo sapiens

Study: GSE105216

Protocol: 10X

Year: 2017

GSE109205 Study


Homo sapiens

Study: GSE109205

Protocol: Drop-seq

Year: 2018

GSE111049 Study


Homo sapiens

Study: GSE111049

Protocol: 10X

Year: 2019

GSE112570 Study


Homo sapiens

Study: GSE112570

Protocol: 10X

Year: 2018

GSE113036 Study


Homo sapiens

Study: GSE113036

Protocol: 10X

Year: 2018

GSE113089 Study


Homo sapiens

Study: GSE113089

Protocol: 10X

Year: 2018

GSE113196 Study


Homo sapiens

Study: GSE113196

Protocol: 10X

Year: 2018

GSE114374 Study


Homo sapiens

Study: GSE114374

Protocol: 10X

Year: 2018

GSE114530 Study


Homo sapiens

Study: GSE114530

Protocol: 10X

Year: 2019

GSE115469 Study


Homo sapiens

Study: GSE115469

Protocol: 10X

Year: 2018

GSE115982 Study


Homo sapiens

Study: GSE115982

Protocol: 10X

Year: 2018

GSE116555 Study


Homo sapiens

Study: GSE116555

Protocol: 10X

Year: 2018

GSE119594 Study


Homo sapiens

Study: GSE119594

Protocol: 10X

Year: 2019

GSE121429 Study


Homo sapiens

Study: GSE121429

Protocol: 10X

Year: 2019

GSE85241 Study


Homo sapiens

Study: GSE85241

Protocol: CEL-seq2

Year: 2016

GSE97564 Study


Homo sapiens

Study: GSE97564

Protocol: 10X

Year: 2017

SRA676027 Study


Homo sapiens

Study: SRA676027

Protocol: 10X

Year: 2018

data1 Study


Homo sapiens

Study: data1

Protocol: 10X

Year: 2021

data12 Study


Homo sapiens

Study: data12

Protocol: 10X

Year: 2020

data13 Study


Homo sapiens

Study: data13

Protocol: 10X

Year: 2020

data14 Study


Homo sapiens

Study: data14

Protocol: 10X

Year: 2020

data15 Study


Homo sapiens

Study: data15

Protocol: 10X

Year: 2020

data16 Study


Homo sapiens

Study: data16

Protocol: 10X

Year: 2019

data17 Study


Homo sapiens

Study: data17

Protocol: 10X

Year: 2019

data18 Study


Homo sapiens

Study: data18

Protocol: 10X

Year: 2019

data19 Study


Homo sapiens

Study: data19

Protocol: 10X

Year: 2019

data2 Study


Homo sapiens

Study: data2

Protocol: 10X

Year: 2021

data20 Study


Homo sapiens

Study: data20

Protocol: 10X

Year: 2018

data21 Study


Homo sapiens

Study: data21

Protocol: 10X

Year: 2018

data22 Study


Homo sapiens

Study: data22

Protocol: 10X

Year: 2018

data23 Study


Homo sapiens

Study: data23

Protocol: 10X

Year: 2018

data25 Study


Homo sapiens

Study: data25

Protocol: 10X

Year: 2017

data26 Study


Homo sapiens

Study: data26

Protocol: 10X

Year: 2017

data5 Study


Homo sapiens

Study: data5

Protocol: 10X

Year: 2021

data6 Study


Homo sapiens

Study: data6

Protocol: 10X

Year: 2021

data8 Study


Homo sapiens

Study: data8

Protocol: 10X

Year: 2020

GSE100106 Study


Mus musculus

Study: GSE100106

Protocol: 10X

Year: 2017

GSE100320 Study


Mus musculus

Study: GSE100320

Protocol: 10X

Year: 2018

GSE101099 Study


Mus musculus

Study: GSE101099

Protocol: 10X

Year: 2018

GSE102086 Study


Mus musculus

Study: GSE102086

Protocol: 10X

Year: 2018

GSE102665 Study


Mus musculus

Study: GSE102665

Protocol: 10X

Year: 2018

GSE103574 Study


Mus musculus

Study: GSE103574

Protocol: 10X

Year: 2017

GSE106264 Study


Mus musculus

Study: GSE106264

Protocol: 10X

Year: 2018

GSE107909 Study


Mus musculus

Study: GSE107909

Protocol: 10X

Year: 2017

GSE107910 Study


Mus musculus

Study: GSE107910

Protocol: Drop-seq

Year: 2018

GSE107910 Study


Mus musculus

Study: GSE107910

Protocol: Drop-seq

Year: 2018

GSE108788 Study


Mus musculus

Study: GSE108788

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE109774 Study


Mus musculus

Study: GSE109774

Protocol: 10X

Year: 2018

GSE110909 Study


Mus musculus

Study: GSE110909

Protocol: 10X

Year: 2018

GSE111588 Study


Mus musculus

Study: GSE111588

Protocol: 10X

Year: 2018

GSE112671 Study


Mus musculus

Study: GSE112671

Protocol: 10X

Year: 2018

GSE112837 Study


Mus musculus

Study: GSE112837

Protocol: 10X

Year: 2019

GSE113043 Study


Mus musculus

Study: GSE113043

Protocol: 10X

Year: 2018

GSE113320 Study


Mus musculus

Study: GSE113320

Protocol: 10X

Year: 2020

GSE113466 Study


Mus musculus

Study: GSE113466

Protocol: 10X

Year: 2018

GSE113854 Study


Mus musculus

Study: GSE113854

Protocol: 10X

Year: 2019

GSE117770 Study


Mus musculus

Study: GSE117770

Protocol: 10X

Year: 2019

GSE118486 Study


Mus musculus

Study: GSE118486

Protocol: 10X

Year: 2019

GSE120410 Study


Mus musculus

Study: GSE120410

Protocol: 10X

Year: 2018

GSE120421 Study


Mus musculus

Study: GSE120421

Protocol: 10X

Year: 2019

GSE121891 Study


Mus musculus

Study: GSE121891

Protocol: 10X

Year: 2018

GSE122730 Study


Mus musculus

Study: GSE122730

Protocol: 10X

Year: 2019

GSE123400 Study


Mus musculus

Study: GSE123400

Protocol: 10X

Year: 2019

GSE123587 Study


Mus musculus

Study: GSE123587

Protocol: 10X

Year: 2019

GSE124562 Study


Mus musculus

Study: GSE124562

Protocol: 10X

Year: 2019

GSE125492 Study


Mus musculus

Study: GSE125492

Protocol: 10X

Year: 2019

GSE126707 Study


Mus musculus

Study: GSE126707

Protocol: 10X

Year: 2019

GSE127724 Study


Mus musculus

Study: GSE127724

Protocol: 10X

Year: 2019

GSE128854 Study


Mus musculus

Study: GSE128854

Protocol: 10X

Year: 2018

GSE128854 Study


Mus musculus

Study: GSE128854

Protocol: 10X

Year: 2018

GSE128854 Study


Mus musculus

Study: GSE128854

Protocol: 10X

Year: 2018

GSE128854 Study


Mus musculus

Study: GSE128854

Protocol: 10X

Year: 2018

GSE87544 Study


Mus musculus

Study: GSE87544

Protocol: Drop-seq

Year: 2017

GSE92865 Study


Mus musculus

Study: GSE92865

Protocol: 10X

Year: 2017

GSE99714 Study


Mus musculus

Study: GSE99714

Protocol: 10X

Year: 2017

GSE114615 Study


Arabidopsis thaliana

Study: GSE114615

Protocol: Drop-seq

Year: 2019

GSE121619 Study


Arabidopsis thaliana

Study: GSE121619

Protocol: 10X

Year: 2019

GSE122687 Study


Arabidopsis thaliana

Study: GSE122687

Protocol: Drop-seq

Year: 2019

GSE123013 Study


Arabidopsis thaliana

Study: GSE123013

Protocol: 10X

Year: 2019

GSE152766 Study


Arabidopsis thaliana

Study: GSE152766

Protocol: 10X

Year: 2019

GSE158761 Study


Arabidopsis thaliana

Study: GSE158761

Protocol: 10X

Year: 2020

GSE161332 Study


Arabidopsis thaliana

Study: GSE161332

Protocol: 10X

Year: 2019

SRP182008 Study


Arabidopsis thaliana

Study: SRP182008

Protocol: 10X

Year: 2019

SRP285040 Study


Arabidopsis thaliana

Study: SRP285040

Protocol: 10X

Year: 2020

GSE157580 Study


Chlamydomonas reinhardtii

Study: GSE157580

Protocol: 10X

Year: 2020

GSE146034(GSM4363200) Study


Oryza sativa Indica

Study: GSE146034(GSM4363200)

Protocol: 10X

Year: 2020

GSE146034(GSM4363201) Study


Oryza sativa Japonica

Study: GSE146034(GSM4363201)

Protocol: 10X

Year: 2020

GSE157757 Study


Zea mays

Study: GSE157757

Protocol: 10X

Year: 2021