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POLYA SIGNAL
GSE152766
Basic Information
Study
GSE152766
Organism
Arabidopsis thaliana
(TAIR10)
Tissue
Whole root
Protocol
10X
Reference
Denyer, T., et al. (2019). Spatiotemporal Developmental Trajectories in the Arabidopsis Root Revealed Using High-Throughput Single-Cell RNA Sequencing. Developmental Cell 48(6): 840-852.e845.
Experiments
19
GSM4625993
GSM4625994
GSM4625995
GSM4625996
GSM4625997
GSM4625998
GSM4625999
GSM4626000
GSM4626001
GSM4626002
GSM4626003
GSM4626004
GSM4626005
GSM4626006
GSM4626007
GSM4626008
GSM4626009
GSM4626010
GSM4626011
Gene#
26160
Cell#
15827
PolyA site#
scAPAtrap
26564
Gene with polyA site#
scAPAtrap
21010
APA event#
scAPAtrap
7026
Gene with APA event#
scAPAtrap
3260
Cell types
11
Trichoblast: 3553
Cortex: 1968
Columella: 1589
Phloem: 3862
Endodermis: 674
Atrichoblast: 2468
Quiescent Center: 1223
Xylem: 476
Lateral Root Cap: 10
Procambium: 3
Pericycle: 1
Single Nucleotide Profile
Cell type
Atrichoblast
Columella
Cortex
Endodermis
Lateral_Root_Cap
Pericycle
Phloem
Procambium
Quiescent_Center
Trichoblast
Xylem
Sequence
Single Nucleotide Profile
Motifs
Cell type
Atrichoblast
Columella
Cortex
Endodermis
Lateral_Root_Cap
Pericycle
Phloem
Procambium
Quiescent_Center
Trichoblast
Xylem
Cis element
FUE (-100 to -50)
NUE (-50 to 0)
DE (0 to +50)
Motif
More Details
Motif Logo
