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GSE103574

Basic Information
Study GSE103574
Organism Mus musculus (mm10)
Tissue Embryoid body
Protocol 10X
Reference Weintraub, A. S., et al. (2017). YY1 Is a Structural Regulator of Enhancer-Promoter Loops. Cell 171(7): 1573-1588.e1528.
Experiments 2 GSM2774584GSM2774585
Gene# 19744 Cell# 1351
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 2

 APA information of the complied study
PolyA Site Expression
APA Usage
Weighted 3' UTR Length
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Box plot showing the poly(A) site expression of this gene in different cell types
24681012V6.5_mES_noDrugV6.5_mES_yesDrug
V6.5_mES_noDrugV6.5_mES_yesDrugPoly(A) site expression
UMAP showing 2D embeddings of cell types based on the gene expression profile
−15−10−505−50510
V6.5_mES_noDrugV6.5_mES_yesDrugUMAP_1UMAP_2
UMAP showing 2D embeddings of batches based on the gene expression profile
−15−10−505−50510
GSM2774584GSM2774585UMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−15−10−505−50510
246810Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression
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