Experiment	GSM2774584	Study	GSE103574 
Organism	Mus musculus (mm10)	Tissue	Embryoid body
Protocol	10X	Sample#	1
Sample Run	SRR6011532
Reference	Weintraub, A. S., et al. (2017). YY1 Is a Structural Regulator of Enhancer-Promoter Loops. Cell 171(7): 1573-1588.e1528.

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Gene#	19534	Cell#	4885
PolyA site#	scAPAtrap 5743Sierra 8324	Gene with polyA site#	scAPAtrap 5142Sierra 7138
APA event#	scAPAtrap 1150Sierra 2193	Gene with APA event#	scAPAtrap 549Sierra 1009
Cell types 1	V6.5_mES_noDrug: 4885

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

Tools

scAPAtrap Sierra

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Box plot showing in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and