Experiment	GSM2774585	Study	GSE103574 
Organism	Mus musculus (mm10)	Tissue	Embryoid body
Protocol	10X	Sample#	1
Sample Run	SRR6011533
Reference	Weintraub, A. S., et al. (2017). YY1 Is a Structural Regulator of Enhancer-Promoter Loops. Cell 171(7): 1573-1588.e1528.

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Gene#	16525	Cell#	1862
PolyA site#	scAPAtrap 6045Sierra 7326	Gene with polyA site#	scAPAtrap 5466Sierra 6385
APA event#	scAPAtrap 1088Sierra 1742	Gene with APA event#	scAPAtrap 509Sierra 804
Cell types 1	V6.5_mES_yesDrug: 1862

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

Tools

scAPAtrap Sierra

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Box plot showing in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and