Experiment	GSM2677817	Study	GSE100320 
Organism	Mus musculus (mm10)	Tissue	Subventricular zone
Protocol	10X	Sample#	1
Sample Run	SRR5725936
Reference	Shah, P. T., et al. (2018). Single-Cell Transcriptomics and Fate Mapping of Ependymal Cells Reveals an Absence of Neural Stem Cell Function. Cell 173(4): 1045-1057.e1049.

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Gene#	12255	Cell#	312
PolyA site#	scAPAtrap 9389Sierra 6565	Gene with polyA site#	scAPAtrap 8529Sierra 5828
APA event#	scAPAtrap 1604Sierra 1339	Gene with APA event#	scAPAtrap 744Sierra 614
Cell types 6	Neural stem cell: 174Ependymal cells: 73Quiescent neural stem cell: 17Oligodendrocyte: 16Endothelial cell: 20Microglial cell: 12

Tools

scAPAtrap Sierra

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Box plot showing in different cell types

UMAP showing 2D embeddings of celltypes based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and