Study	GSE100320
Organism	Mus musculus (mm10)
Tissue	Subventricular zone
Protocol	10X
Reference	Shah, P. T., et al. (2018). Single-Cell Transcriptomics and Fate Mapping of Ependymal Cells Reveals an Absence of Neural Stem Cell Function. Cell 173(4): 1045-1057.e1049.
Experiments 3	GSM2677817GSM2677818GSM2677819

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Gene#	14717	Cell#	1698
PolyA site#	scAPAtrap 14428	Gene with polyA site#	scAPAtrap 13864
APA event#	scAPAtrap 2505	Gene with APA event#	scAPAtrap 2054
Cell types 7	Neural stem cell: 174Ependymal cells: 113Quiescent neural stem cell: 386Oligodendrocyte: 37Endothelial cell: 20Microglial cell: 12Early intermediate precursor cell: 956

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

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Box plot showing the of this gene in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing 2D embeddings of batches based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and