Study	GSE158761
Organism	Arabidopsis thaliana (TAIR10)
Tissue	Whole root
Protocol	10X
Reference	Gala, Hardik P., et al. A single cell view of the transcriptome during lateral root initiation in Arabidopsis thaliana. bioRxiv?(2020).
Experiments 6	GSM4809923GSM4809924GSM4809925GSM4809926GSM4809927GSM4809928

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Gene#	18832	Cell#	6658
PolyA site#	scAPAtrap 18255	Gene with polyA site#	scAPAtrap 16702
APA event#	scAPAtrap 1452	Gene with APA event#	scAPAtrap 743
Cell types 12	Epidermis: 1431Mature Pericycle: 336Ambiguous Stele Cells: 698Columella/ Root Cap: 1015Xylem Pole Pericycle: 534Xylem: 242Phloem Pole Pericycle: 1206Lateral Root Endodermis: 276Endodermis: 410Phloem: 216Lateral Root Primordia: 167Cortex: 127

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

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Box plot showing the of this gene in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing 2D embeddings of batches based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and