Experiment	GSM4809925	Study	GSE158761 
Organism	Arabidopsis thaliana (TAIR10)	Tissue	Whole root
Protocol	10X	Sample#	4
Sample Run	SRR12743455 SRR12743456 SRR12743457 SRR12743458
Reference	Gala, Hardik P., et al. A single cell view of the transcriptome during lateral root initiation in Arabidopsis thaliana. bioRxiv?(2020).

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Gene#	17570	Cell#	851
PolyA site#	scAPAtrap 10621Sierra 1398	Gene with polyA site#	scAPAtrap 10453Sierra 1358
APA event#	scAPAtrap 327Sierra 78	Gene with APA event#	scAPAtrap 159Sierra 38
Cell types 12	Xylem: 29Epidermis: 100Columella/ Root Cap: 222Lateral Root Endodermis: 33Xylem Pole Pericycle: 41Ambiguous Stele Cells: 111Phloem Pole Pericycle: 135Endodermis: 12Lateral Root Primordia: 42Mature Pericycle: 82Phloem: 39Cortex: 5

Tools

scAPAtrap Sierra

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Box plot showing in different cell types

UMAP showing 2D embeddings of celltypes based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and