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GSM3449590



  Basic Information
Experiment GSM3449590 Study GSE121891
Organism Mus musculus (mm10) Tissue Olfactory bulb
Protocol 10X Sample# 4
Sample Run SRR8126386 SRR8126387 SRR8126388 SRR8126389
Reference Tepe, B., et al. (2018). Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons. Cell Reports 25(10): 2689-2703.e2683.

Gene# 23887 Cell# 3895
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 13

  PolyA Site Expression
scAPAtrap
Sierra
Box plot showing poly(A) site expression in different cell types
0204060UnknownSchwann cellsPurkinje neuronsEndothelial cellsT memory cellsAstrocytesMicrogliaOligodendrocyte progenitor cellsOligodendrocytesMacrophagesPericytesSmooth muscle cellsInterneurons
UnknownSchwann cellsPurkinje neuronsEndothelial cellsT memory cellsAstrocytesMicrogliaOligodendrocyte progenitor cellsOligodendrocytesMacrophagesPericytesSmooth muscle cellsInterneuronsPoly(A) site expression
UMAP showing 2D embeddings of celltypes based on the gene expression profile
−1001020−20−10010
UnknownSchwann cellsPurkinje neuronsEndothelial cellsT memory cellsAstrocytesMicrogliaOligodendrocyte progenitor cellsOligodendrocytesMacrophagesPericytesSmooth muscle cellsInterneuronsUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−1001020−20−10010
102030405060Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression
0510152025300102030405060
Gene expressionPoly(A) site expression