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SRX3859533

  Basic Information
Experiment SRX3859533 Study SRA676027
Organism Homo sapiens (GRCh38) Tissue Embryonic stem cell line
Protocol 10X Sample# 1
Sample Run SRR6911583
Reference Unpublished
Gene# 20161 Cell# 7404
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 4

  Weighted 3' UTR Length
scAPAtrap
Sierra
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Box plot showing weighted 3' UTR length in different cell types
20004000OsteocytesPancreatic stellate cellsDecidual cellsPulmonary vascular smooth muscle cells
OsteocytesPancreatic stellate cellsDecidual cellsPulmonary vascular smooth muscle cellsWeighted 3' UTR length
UMAP showing 2D embeddings of celltypes based on the gene expression profile
−10−50510−6−4−20246
OsteocytesPancreatic stellate cellsDecidual cellsPulmonary vascular smooth muscle cellsUMAP_1UMAP_2
UMAP showing distribution weighted 3' UTR length in single cells
−10−50510−6−4−20246
10002000300040005000Weighted 3' UTR lengthUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and weighted 3' UTR length
24681012141610002000300040005000
Gene expressionWeighted 3' UTR length

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