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GSM3484259

  Basic Information
Experiment GSM3484259 Study GSE122730
Organism Mus musculus (mm10) Tissue Nerve
Protocol 10X Sample# 2
Sample Run SRR8258196 SRR8258197
Reference Fletcher, J. S., et al. (2019). Cxcr3-expressing leukocytes are necessary for neurofibroma formation in mice. JCI Insight 4(3).
Gene# 25507 Cell# 5139
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 7

  Weighted 3' UTR Length
scAPAtrap
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Box plot showing weighted 3' UTR length in different cell types
10002000300040005000UnknownTrigeminal neuronsNeutrophilsSchwann cellsErythroid-like and erythroid precursor cellsAlveolar macrophagesSmooth muscle cells
UnknownTrigeminal neuronsNeutrophilsSchwann cellsErythroid-like and erythroid precursor cellsAlveolar macrophagesSmooth muscle cellsWeighted 3' UTR length
UMAP showing 2D embeddings of celltypes based on the gene expression profile
−20−10010−1001020
UnknownTrigeminal neuronsNeutrophilsSchwann cellsErythroid-like and erythroid precursor cellsAlveolar macrophagesSmooth muscle cellsUMAP_1UMAP_2
UMAP showing distribution weighted 3' UTR length in single cells
−20−10010−1001020
10002000300040005000Weighted 3' UTR lengthUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and weighted 3' UTR length
051015202510002000300040005000
Gene expressionWeighted 3' UTR length

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