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GSM3400453

  Basic Information
Experiment GSM3400453 Study GSE120410
Organism Mus musculus (mm10) Tissue Pituitary gland
Protocol 10X Sample# 1
Sample Run SRR7898910
Reference Cheung, L. Y. M., et al. (2018). Single-Cell RNA Sequencing Reveals Novel Markers of Male Pituitary Stem Cells and Hormone-Producing Cell Types. Endocrinology 159(12): 3910-3924.
Gene# 17598 Cell# 7096
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 4

  Weighted 3' UTR Length
scAPAtrap
Sierra
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Box plot showing weighted 3' UTR length in different cell types
10001500200025003000Epithelial cellsBasal cellsIntestinal stem cellMesothelial cells
Epithelial cellsBasal cellsIntestinal stem cellMesothelial cellsWeighted 3' UTR length
UMAP showing 2D embeddings of celltypes based on the gene expression profile
−10−50510−15−10−505
Epithelial cellsBasal cellsIntestinal stem cellMesothelial cellsUMAP_1UMAP_2
UMAP showing distribution weighted 3' UTR length in single cells
−10−50510−15−10−505
10001500200025003000Weighted 3' UTR lengthUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and weighted 3' UTR length
24681010001500200025003000
Gene expressionWeighted 3' UTR length

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