HOME/ 3' UTR length/

GSM3140593

  Basic Information
Experiment GSM3140593 Study GSE114374
Organism Homo sapiens (GRCh38) Tissue Colon
Protocol 10X Sample# 1
Sample Run SRR7159836
Reference Kinchen, J., et al. (2018). Structural Remodeling of the Human Colonic Mesenchyme in Inflammatory Bowel Disease. Cell 175(2): 372-386 e317.
Gene# 17207 Cell# 1910
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 2

  Weighted 3' UTR Length
scAPAtrap
Sierra
Download
Box plot showing weighted 3' UTR length in different cell types
1000150020002500Intestinal stem cellColonic stem cell
Intestinal stem cellColonic stem cellWeighted 3' UTR length
UMAP showing 2D embeddings of celltypes based on the gene expression profile
−20−15−10−50510−10−5051015
Intestinal stem cellColonic stem cellUMAP_1UMAP_2
UMAP showing distribution weighted 3' UTR length in single cells
−20−15−10−50510−10−5051015
100015002000Weighted 3' UTR lengthUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and weighted 3' UTR length
0.511.522.51000150020002500
Gene expressionWeighted 3' UTR length

Copyright © 2019-2024 BMI Lab, All Rights Reserved.
Registration Number: 闽ICP备19019942号