HOME/ 3' UTR length/

GSM2699157

  Basic Information
Experiment GSM2699157 Study GSE101099
Organism Mus musculus (mm10) Tissue Pancreas
Protocol 10X Sample# 1
Sample Run SRR5815723
Reference Byrnes, L. E., et al. (2018). Lineage dynamics of murine pancreatic development at single-cell resolution. Nature Communications 9(1): 3922.
Gene# 15206 Cell# 2309
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 4

  Weighted 3' UTR Length
scAPAtrap
Sierra
Download
Box plot showing weighted 3' UTR length in different cell types
5001000150020002500Pancreatic progenitor cellsPancreatic stellate cellsAlpha cellAcinar cells
Pancreatic progenitor cellsPancreatic stellate cellsAlpha cellAcinar cellsWeighted 3' UTR length
UMAP showing 2D embeddings of celltypes based on the gene expression profile
−20−10010−15−10−505101520
Pancreatic progenitor cellsPancreatic stellate cellsAlpha cellAcinar cellsUMAP_1UMAP_2
UMAP showing distribution weighted 3' UTR length in single cells
−20−10010−15−10−505101520
5001000150020002500Weighted 3' UTR lengthUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and weighted 3' UTR length
0102030405060705001000150020002500
Gene expressionWeighted 3' UTR length

Copyright © 2019-2024 BMI Lab, All Rights Reserved.
Registration Number: 闽ICP备19019942号