Experiment	GSM3502679	Study	GSE123400 
Organism	Mus musculus (mm10)	Tissue	Ear skin
Protocol	10X	Sample#	1
Sample Run	SRR8284734
Reference	Tan, L., et al. (2019). Single-Cell Transcriptomics Identifies the Adaptation of Scart1+ V6+ T Cells to Skin Residency as Activated Effector Cells. Cell Reports 27(12): 3657-3671.e3654.

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Gene#	16538	Cell#	2253
PolyA site#	scAPAtrap 8894Sierra 9363	Gene with polyA site#	scAPAtrap 7743Sierra 7585
APA event#	scAPAtrap 2129Sierra 3187	Gene with APA event#	scAPAtrap 978Sierra 1413
Cell types 2	T memory cells: 855T cells: 1398

Tools

scAPAtrap Sierra

scAPAtrap

Sierra

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Box plot showing APA usage in different cell types

UMAP showing 2D embeddings of celltypes based on the gene expression profile

UMAP showing distribution APA usage in single cells

Scatter plot showing correlation between gene expression and APA usage