Experiment	GSM3178783	Study	GSE115469 
Organism	Homo sapiens (GRCh38)	Tissue	Liver
Protocol	10X	Sample#	1
Sample Run	SRR7276475
Reference	MacParland, S. A., et al. (2018). Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations. Nat Commun 9(1): 4383.

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Gene#	14026	Cell#	1219
PolyA site#	scAPAtrap 8572Sierra 9729	Gene with polyA site#	scAPAtrap 7765Sierra 8072
APA event#	scAPAtrap 1483Sierra 2899	Gene with APA event#	scAPAtrap 676Sierra 1262
Cell types 4	Hepatocyte: 636Liver progenitor cell: 102Memory B cell: 359Kupffer cell: 122

Tools

scAPAtrap Sierra

scAPAtrap

Sierra

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Box plot showing APA usage in different cell types

UMAP showing 2D embeddings of celltypes based on the gene expression profile

UMAP showing distribution APA usage in single cells

Scatter plot showing correlation between gene expression and APA usage