Study	SRP285040
Organism	Arabidopsis thaliana (TAIR10)
Tissue	Whole root
Protocol	10X
Reference	Long, Y., et al. (2020). Single-nucleus full-length RNA profiling in plants incorporates isoform information to facilitate cell type identification. bioRxiv: 2020.2011.2025.397919.
Experiments 1	SRX9174978

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Gene#	9211	Cell#	1113
PolyA site#	scAPAtrap 19682	Gene with polyA site#	scAPAtrap 17908
APA event#	scAPAtrap 3398	Gene with APA event#	scAPAtrap 1628
Cell types 8	Trichoblast: 234Cortex: 243Quiescent Center: 177Endodermis: 125Phloem: 132Xylem: 50Columella: 142Atrichoblast: 10

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

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Box plot showing the of this gene in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing 2D embeddings of batches based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and