| Gene id | ENSMUSG00000032921 | Gene name | Odf4 |
|---|---|---|---|
| Transcript id | ENSMUST00000038932 | Synonym | Oppo1 |
| Location | 11: 68812661-68817907 | Strand | reverse |
| Description | outer dense fiber of sperm tails 4 [Source:MGI Symbol;Acc:MGI:2182079] | ||
| GO terms | GO:0016020 GO:0016021 GO:0005886 GO:0003674 GO:0008150 GO:0007275 GO:0007283 GO:0030154 GO:0031514 GO:0001520 | ||
| Method | Chr | Strand | PolyA Coord | Peak Start | Peak End |
|---|---|---|---|---|---|
| scAPAtrap | 11 | reverse | 68921238 | 68921238 | 68921652 |
| scAPAtrap | 11 | reverse | 68921835 | 68921835 | 68922175 |
| Sierra | 11 | reverse | 68921835 | 68921835 | 68922141 |
| Experiment | GSM2803334 | Study | GSE104556 |
|---|---|---|---|
| Organism | Mus musculus (mm10) | Tissue | whole testis |
| Protocol | 10X | Sample# | 1 |
| Sample Run | SRR6129050 | ||
| Reference | Lukassen, S., et al. (2018). Single-cell RNA sequencing of adult mouse testes. Scientific Data 5(1): 180192. | ||
This plot shows the coverage track of poly(A) sites in this gene. The upper panel shows the gene model. The "PAS" track marks the peaks of poly(A) sites identified by the scAPAtrap Lower panels show the read coverage of poly(A) sites in different cell types.
