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PolyA Site Expression





  Gene information
Gene id ENSMUSG00000032921 Gene name Odf4
Transcript id ENSMUST00000038932 Synonym Oppo1
Location 11: 68812661-68817907 Strand reverse
Description outer dense fiber of sperm tails 4 [Source:MGI Symbol;Acc:MGI:2182079]
GO terms GO:0016020 GO:0016021 GO:0005886 GO:0003674 GO:0008150 GO:0007275 GO:0007283 GO:0030154 GO:0031514 GO:0001520

Method Chr Strand PolyA Coord Peak Start Peak End

  Experiment information
Experiment GSM2803334 Study GSE104556
Organism Mus musculus (mm10) Tissue whole testis
Protocol 10X Sample# 1
Sample Run SRR6129050
Reference Lukassen, S., et al. (2018). Single-cell RNA sequencing of adult mouse testes. Scientific Data 5(1): 180192.

  Read coverage
This plot shows the coverage track of poly(A) sites in this gene. The upper panel shows the gene model. The "PAS" track marks the peaks of poly(A) sites identified by the scAPAtrap Lower panels show the read coverage of poly(A) sites in different cell types.
  Polyadenylation information
Box plot showing of this gene in different cell types
UMAP showing distribution in single cells
UMAP showing 2D embeddings based on the gene expression profile
Scatter plot showing correlation between gene expression and