HOME
SEARCH
EXPERIMENT
APA INDEX
POLYA SITE
APA USAGE
3' UTR LENGTH
STUDY
POLYA SIGNAL
DOWNLOAD
STATISTICS
HELP
HOME
EXPERIMENT
data8
Basic Information
Experiment
data8
Study
data8
Organism
Homo sapiens
(GRCh38)
Tissue
PBMC
Protocol
10X
Sample#
1
Sample Run
-
Reference
PBMCs from a Healthy Donor: Targeted, Immunology Panel
Gene#
933
Cell#
4093
PolyA site#
scAPAtrap
3547
Sierra
1970
Gene with polyA site#
scAPAtrap
3045
Sierra
1185
APA event#
scAPAtrap
846
Sierra
1156
Gene with APA event#
scAPAtrap
344
Sierra
371
Cell types
6
Dendritic cells: 1751
Plasmacytoid dendritic cell: 94
CD14+CD16+ Monocytes: 1418
T cell: 336
CD8+ T cell: 275
B cell: 219
APA information
APA index
PolyA Site Expression
APA Usage
Weighted 3' UTR Length
Tools
scAPAtrap
Sierra
Download
Box plot showing
in different cell types
UMAP showing 2D embeddings of cell types based on the gene expression profile
UMAP showing distribution
in single cells
Scatter plot showing correlation between gene expression and