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data6



  Basic Information
Experiment data6 Study data6
Organism Homo sapiens (GRCh38) Tissue PBMC
Protocol 10X Sample# 1
Sample Run -
Reference 10k Human PBMCs Multiplexed, 2 CMOs - Human 2

Gene# 18552 Cell# 6009
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 10

  APA information  
PolyA Site Expression
APA Usage
Weighted 3' UTR Length
scAPAtrap
Sierra
Box plot showing poly(A) site expression in different cell types
2468B cellCD14+CD16+ MonocytesNaive T cellNK cellT cellMacrophageCD8+ T cellMegakaryocyte progenitor cellPlasmacytoid dendritic cellMonocyte derived dendritic cell
B cellCD14+CD16+ MonocytesNaive T cellNK cellT cellMacrophageCD8+ T cellMegakaryocyte progenitor cellPlasmacytoid dendritic cellMonocyte derived dendritic cellPoly(A) site expression
UMAP showing 2D embeddings of cell types based on the gene expression profile
−10−50510−15−10−50510
B cellCD14+CD16+ MonocytesNaive T cellNK cellT cellMacrophageCD8+ T cellMegakaryocyte progenitor cellPlasmacytoid dendritic cellMonocyte derived dendritic cellUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−10−50510−15−10−50510
2468Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression