Experiment	SRX3859529	Study	SRA676027 
Organism	Homo sapiens (GRCh38)	Tissue	Embryonic stem cell line
Protocol	10X	Sample#	1
Sample Run	SRR6911587
Reference	Unpublished

---

Gene#	20575	Cell#	3422
PolyA site#	scAPAtrap 10572Sierra 8997	Gene with polyA site#	scAPAtrap 9130Sierra 7585
APA event#	scAPAtrap 2652Sierra 2555	Gene with APA event#	scAPAtrap 1210Sierra 1143
Cell types 5	Merkel cells: 369Luminal epithelial cells: 474Pancreatic stellate cells: 979Decidual cells: 1117Osteocytes: 483

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

Tools

scAPAtrap Sierra

Download

Box plot showing in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and