Experiment	GSM4770980	Study	GSE157580 
Organism	Chlamydomonas reinhardtii (Chlamydomonas_reinhardtii_v5.5)	Tissue	Cultured Chlamydomonas cells
Protocol	10X	Sample#	1
Sample Run	SRR12604024
Reference	Ma, F., et al. (2020). Single-Cell RNA Sequencing of Batch Chlamydomonas Cultures Reveals Heterogeneity in their Diurnal Cycle Phase. bioRxiv: 2020.2009.2015.298844.

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Gene#	15118	Cell#	10990
PolyA site#	scAPAtrap 2643Sierra 5949	Gene with polyA site#	scAPAtrap 2557Sierra 5727
APA event#	scAPAtrap 163Sierra 408	Gene with APA event#	scAPAtrap 77Sierra 195
Cell types 1	Fe_pos: 10990

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

PolyA Site Expression

APA Usage

Weighted 3' UTR Length

Tools

scAPAtrap Sierra

scAPAtrap

Sierra

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Box plot showing poly(A) site expression in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing distribution poly(A) site expression in single cells

Scatter plot showing correlation between gene expression and poly(A) site expression