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GSM3575498



  Basic Information
Experiment GSM3575498 Study GSE125492
Organism Mus musculus (mm10) Tissue Gonadal adipose tissue
Protocol 10X Sample# 1
Sample Run SRR8476548
Reference Dahlgren, M. W., et al. (2019). Adventitial Stromal Cells Define Group 2 Innate Lymphoid Cell Tissue Niches. Immunity 50(3): 707-722.e706.

Gene# 14389 Cell# 3585
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 4

  APA information  
PolyA Site Expression
APA Usage
Weighted 3' UTR Length
scAPAtrap
Sierra
Box plot showing poly(A) site expression in different cell types
123456MacrophageLuminal epithelial cellsEndothelial cellProcr+ basal cell
MacrophageLuminal epithelial cellsEndothelial cellProcr+ basal cellPoly(A) site expression
UMAP showing 2D embeddings of cell types based on the gene expression profile
−10−50510−10−505
MacrophageLuminal epithelial cellsEndothelial cellProcr+ basal cellUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−10−50510−10−505
23456Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression
1.522.533.544.555.51234567
Gene expressionPoly(A) site expression