Experiment	GSM3575498	Study	GSE125492 
Organism	Mus musculus (mm10)	Tissue	Gonadal adipose tissue
Protocol	10X	Sample#	1
Sample Run	SRR8476548
Reference	Dahlgren, M. W., et al. (2019). Adventitial Stromal Cells Define Group 2 Innate Lymphoid Cell Tissue Niches. Immunity 50(3): 707-722.e706.

---

Gene#	14389	Cell#	3585
PolyA site#	scAPAtrap 11243Sierra 8866	Gene with polyA site#	scAPAtrap 9679Sierra 7223
APA event#	scAPAtrap 2853Sierra 2879	Gene with APA event#	scAPAtrap 1289Sierra 1241
Cell types 4	Macrophage: 1650Luminal epithelial cells: 563Endothelial cell: 979Procr+ basal cell: 393

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

PolyA Site Expression

APA Usage

Weighted 3' UTR Length

Tools

scAPAtrap Sierra

scAPAtrap

Sierra

Download

Box plot showing poly(A) site expression in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing distribution poly(A) site expression in single cells

Scatter plot showing correlation between gene expression and poly(A) site expression