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GSM3507491



  Basic Information
Experiment GSM3507491 Study GSE123587
Organism Mus musculus (mm10) Tissue Aorta
Protocol 10X Sample# 1
Sample Run SRR8310804
Reference Lin, J.-D., et al. (2019). Single-cell analysis of fate-mapped macrophages reveals heterogeneity, including stem-like properties, during atherosclerosis progression and regression. JCI Insight 4(4).

Gene# 13193 Cell# 2357
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 2

  APA information  
PolyA Site Expression
APA Usage
Weighted 3' UTR Length
scAPAtrap
Sierra
Box plot showing poly(A) site expression in different cell types
123456OsteocytesAirway smooth muscle cells
OsteocytesAirway smooth muscle cellsPoly(A) site expression
UMAP showing 2D embeddings of cell types based on the gene expression profile
−4−2024−6−4−20246
OsteocytesAirway smooth muscle cellsUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−4−2024−6−4−20246
23456Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression