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GSM3400453

  Basic Information
Experiment GSM3400453 Study GSE120410
Organism Mus musculus (mm10) Tissue Pituitary gland
Protocol 10X Sample# 1
Sample Run SRR7898910
Reference Cheung, L. Y. M., et al. (2018). Single-Cell RNA Sequencing Reveals Novel Markers of Male Pituitary Stem Cells and Hormone-Producing Cell Types. Endocrinology 159(12): 3910-3924.
Gene# 17598 Cell# 7096
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 4

  APA information  
PolyA Site Expression
APA Usage
Weighted 3' UTR Length
scAPAtrap
Sierra
Download
Box plot showing poly(A) site expression in different cell types
24681012Epithelial cellsBasal cellsIntestinal stem cellMesothelial cells
Epithelial cellsBasal cellsIntestinal stem cellMesothelial cellsPoly(A) site expression
UMAP showing 2D embeddings of cell types based on the gene expression profile
−10−50510−15−10−505
Epithelial cellsBasal cellsIntestinal stem cellMesothelial cellsUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−10−50510−15−10−505
24681012Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression

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