Experiment	GSM3140596	Study	GSE114374 
Organism	Homo sapiens (GRCh38)	Tissue	Colon
Protocol	10X	Sample#	1
Sample Run	SRR7159839
Reference	Kinchen, J., et al. (2018). Structural Remodeling of the Human Colonic Mesenchyme in Inflammatory Bowel Disease. Cell 175(2): 372-386 e317.

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Gene#	18296	Cell#	2805
PolyA site#	scAPAtrap 23336Sierra 14853	Gene with polyA site#	scAPAtrap 16485Sierra 10919
APA event#	scAPAtrap 11254Sierra 6664	Gene with APA event#	scAPAtrap 4403Sierra 2741
Cell types 4	Intestinal stem cell: 394Colorectal stem cell: 1079CD4+ T cell: 279Colonic stem cell: 1053

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

Tools

scAPAtrap Sierra

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Box plot showing in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and