Experiment	GSM3040900	Study	GSE109774 
Organism	Mus musculus (mm10)	Tissue	Marrow
Protocol	10X	Sample#	1
Sample Run	SRR6835854
Reference	Tabula Muris, C., et al. (2018). Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. Nature 562(7727): 367-372.

---

Gene#	13402	Cell#	1975
PolyA site#	scAPAtrap 12080Sierra 18784	Gene with polyA site#	scAPAtrap 10205Sierra 10994
APA event#	scAPAtrap 3448Sierra 12513	Gene with APA event#	scAPAtrap 1573Sierra 4733
Cell types 3	Conventional dendritic cell: 511Pre-haematopoietic stem cell: 255Blastema cell: 1209

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

Tools

scAPAtrap Sierra

Download

Box plot showing in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and