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GSM3040895



  Basic Information
Experiment GSM3040895 Study GSE109774
Organism Mus musculus (mm10) Tissue Kidney
Protocol 10X Sample# 1
Sample Run SRR6835849
Reference Tabula Muris, C., et al. (2018). Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. Nature 562(7727): 367-372.

Gene# 13811 Cell# 610
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 3

  APA information  
PolyA Site Expression
APA Usage
Weighted 3' UTR Length
scAPAtrap
Sierra
Box plot showing poly(A) site expression in different cell types
2468T cellDistal tubule cellsProximal tubule cell
T cellDistal tubule cellsProximal tubule cellPoly(A) site expression
UMAP showing 2D embeddings of cell types based on the gene expression profile
−10−50510−15−10−50510
T cellDistal tubule cellsProximal tubule cellUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−10−50510−15−10−50510
2468Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression