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GSM2438924



  Basic Information
Experiment GSM2438924 Study GSE92865
Organism Mus musculus (mm10) Tissue Small intestine
Protocol 10X Sample# 1
Sample Run SRR5127956
Reference Yan, K. S., et al. (2017). Non-equivalence of Wnt and R-spondin ligands during Lgr5+ intestinal stem-cell self-renewal. Nature 545(7653): 238-242.

Gene# 13187 Cell# 1345
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 2

  APA information  
PolyA Site Expression
APA Usage
Weighted 3' UTR Length
scAPAtrap
Sierra
Box plot showing poly(A) site expression in different cell types
2345Dendritic cellPaneth cell
Dendritic cellPaneth cellPoly(A) site expression
UMAP showing 2D embeddings of cell types based on the gene expression profile
−6−4−202−6−4−20246
Dendritic cellPaneth cellUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−6−4−202−6−4−20246
2345Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression
22.533.5422.533.544.555.5
Gene expressionPoly(A) site expression