Experiment	GSM2333577	Study	GSE87544 
Organism	Mus musculus (mm10)	Tissue	Hypothalamus
Protocol	Drop-seq	Sample#	1
Sample Run	SRR4340020
Reference	Chen, R., et al. (2017). Single-Cell RNA-Seq Reveals Hypothalamic Cell Diversity. Cell Reports 18(13): 3227-3241.

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Gene#	8559	Cell#	145
PolyA site#	scAPAtrap 10128Sierra -	Gene with polyA site#	scAPAtrap 8584Sierra -
APA event#	scAPAtrap 2708Sierra -	Gene with APA event#	scAPAtrap 1164Sierra -
Cell types 3	Quiescent neural stem cell: 58Oligodendrocyte: 52Neuron: 35

APA index

PolyA Site Expression APA Usage Weighted 3' UTR Length

Tools

scAPAtrap

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Box plot showing in different cell types

UMAP showing 2D embeddings of cell types based on the gene expression profile

UMAP showing distribution in single cells

Scatter plot showing correlation between gene expression and