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data26
Basic Information
Experiment
data26
Study
data26
Organism
Homo sapiens
(GRCh38)
Tissue
PBMC
Protocol
10X
Sample#
1
Sample Run
-
Reference
8k PBMCs from a Healthy Donor
Gene#
18340
Cell#
8381
PolyA site#
scAPAtrap
18300
Sierra
17243
Gene with polyA site#
scAPAtrap
13630
Sierra
11811
APA event#
scAPAtrap
7944
Sierra
8798
Gene with APA event#
scAPAtrap
3274
Sierra
3378
Cell types
9
CD14+CD16+ monocyte: 1784
T cell: 1113
Naive T cell: 2258
CD8+ T cell: 1175
B cell: 1143
Monocyte derived dendritic cell: 239
Macrophage: 232
Granulocyte: 318
Plasmacytoid dendritic cell: 119
PolyA Site Expression
Tools
scAPAtrap
Sierra
Download
Box plot showing
in different cell types
UMAP showing 2D embeddings of celltypes based on the gene expression profile
UMAP showing distribution
in single cells
Scatter plot showing correlation between gene expression and