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data23
Basic Information
Experiment
data23
Study
data23
Organism
Homo sapiens
(GRCh38)
Tissue
PBMC
Protocol
10X
Sample#
1
Sample Run
-
Reference
1k PBMCs from a Healthy Donor (v3 chemistry)
Gene#
15246
Cell#
1176
PolyA site#
scAPAtrap
11183
Sierra
6088
Gene with polyA site#
scAPAtrap
9492
Sierra
5296
APA event#
scAPAtrap
3075
Sierra
1433
Gene with APA event#
scAPAtrap
1384
Sierra
647
Cell types
9
B cell: 191
CD8+ T cell: 125
T cell: 189
CD14+ Monocytes: 195
Naive T cell: 179
Granulocyte: 106
Megakaryocyte progenitor cell: 52
Plasmacytoid dendritic cell: 52
CD14+CD16+ monocyte: 87
PolyA Site Expression
Tools
scAPAtrap
Sierra
Download
Box plot showing
in different cell types
UMAP showing 2D embeddings of celltypes based on the gene expression profile
UMAP showing distribution
in single cells
Scatter plot showing correlation between gene expression and