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data22
Basic Information
Experiment
data22
Study
data22
Organism
Homo sapiens
(GRCh38)
Tissue
PBMC
Protocol
10X
Sample#
1
Sample Run
-
Reference
1k PBMCs from a Healthy Donor (v2 chemistry)
Gene#
13070
Cell#
995
PolyA site#
scAPAtrap
10244
Sierra
5674
Gene with polyA site#
scAPAtrap
8973
Sierra
5041
APA event#
scAPAtrap
2350
Sierra
1174
Gene with APA event#
scAPAtrap
1079
Sierra
544
Cell types
8
CD14+ Monocytes: 186
Naive T cell: 117
Plasmacytoid dendritic cell: 72
T cell: 228
B cell: 146
CD14+CD16+ monocyte: 124
CD8+ T cell: 89
Macrophage: 33
PolyA Site Expression
Tools
scAPAtrap
Sierra
Download
Box plot showing
in different cell types
UMAP showing 2D embeddings of celltypes based on the gene expression profile
UMAP showing distribution
in single cells
Scatter plot showing correlation between gene expression and