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data21
Basic Information
Experiment
data21
Study
data21
Organism
Homo sapiens
(GRCh38)
Tissue
PBMC
Protocol
10X
Sample#
1
Sample Run
-
Reference
10k PBMCs from a Healthy Donor - Gene Expression and Cell Surface Protein
Gene#
18054
Cell#
7856
PolyA site#
scAPAtrap
14128
Sierra
13849
Gene with polyA site#
scAPAtrap
11285
Sierra
10284
APA event#
scAPAtrap
5005
Sierra
6030
Gene with APA event#
scAPAtrap
2162
Sierra
2471
Cell types
22
CD14+CD16+ Monocytes: 1997
Megakaryocyte progenitor cell: 161
Granulocyte: 849
Naive T cell: 1697
T cell: 1336
B cell: 712
CD8+ T cell: 871
Monocyte derived dendritic cell: 97
Macrophage: 107
Plasmacytoid dendritic cell: 29
PolyA Site Expression
Tools
scAPAtrap
Sierra
Download
Box plot showing
in different cell types
UMAP showing 2D embeddings of celltypes based on the gene expression profile
UMAP showing distribution
in single cells
Scatter plot showing correlation between gene expression and