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data2
Basic Information
Experiment
data2
Study
data2
Organism
Homo sapiens
(GRCh38)
Tissue
PBMC
Protocol
10X
Sample#
1
Sample Run
-
Reference
1k Human PBMCs with TotalSeq-B Human TBNK Antibody Cocktail, 3’ v3.1
Gene#
15837
Cell#
1084
PolyA site#
scAPAtrap
15770
Sierra
4354
Gene with polyA site#
scAPAtrap
11846
Sierra
3820
APA event#
scAPAtrap
6581
Sierra
964
Gene with APA event#
scAPAtrap
2657
Sierra
430
Cell types
10
B cell: 96
CD14+ Monocytes: 360
Macrophage: 99
T cell: 98
CD8+ T cell: 120
Naive T cell: 228
Nuocytes: 53
Plasmacytoid dendritic cell: 30
PolyA Site Expression
Tools
scAPAtrap
Sierra
Download
Box plot showing
in different cell types
UMAP showing 2D embeddings of celltypes based on the gene expression profile
UMAP showing distribution
in single cells
Scatter plot showing correlation between gene expression and