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data19



  Basic Information
Experiment data19 Study data19
Organism Homo sapiens (GRCh38) Tissue PBMC
Protocol 10X Sample# 1
Sample Run -
Reference 5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor with cell surface proteins (Next GEM)

Gene# 18325 Cell# 5459
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 10

  PolyA Site Expression
scAPAtrap
Sierra
Box plot showing poly(A) site expression in different cell types
246MacrophageCD14+ MonocytesNaive T cellNK cellT cellMonocyte derived dendritic cellB cellCD8+ T cellPlasmacytoid dendritic cellMegakaryocyte progenitor cell
MacrophageCD14+ MonocytesNaive T cellNK cellT cellMonocyte derived dendritic cellB cellCD8+ T cellPlasmacytoid dendritic cellMegakaryocyte progenitor cellPoly(A) site expression
UMAP showing 2D embeddings of celltypes based on the gene expression profile
−10−50510−50510
MacrophageCD14+ MonocytesNaive T cellNK cellT cellMonocyte derived dendritic cellB cellCD8+ T cellPlasmacytoid dendritic cellMegakaryocyte progenitor cellUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−10−50510−50510
234567Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression