Experiment	GSM4466788	Study	GSE121619 
Organism	Arabidopsis thaliana (TAIR10)	Tissue	Whole root
Protocol	10X	Sample#	7
Sample Run	SRR11517424 SRR11517426 SRR11517425 SRR11517424 SRR11517425 SRR11517426 SRR11517427
Reference	Jean-Baptiste, K., et al. (2019). Dynamics of Gene Expression in Single Root Cells of Arabidopsis thaliana. The Plant Cell 31(5): 993-1011.

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Gene#	20131	Cell#	1076
PolyA site#	scAPAtrap 13100Sierra 6698	Gene with polyA site#	scAPAtrap 12523Sierra 6614
APA event#	scAPAtrap 1107Sierra 163	Gene with APA event#	scAPAtrap 530Sierra 79
Cell types 9	Phloem: 168Quiescent Center: 112Trichoblast: 397Atrichoblast: 209Cortex: 106Columella: 39Xylem: 41Endodermis: 2Procambium: 2

Tools

scAPAtrap Sierra

scAPAtrap

Sierra

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Box plot showing poly(A) site expression in different cell types

UMAP showing 2D embeddings of celltypes based on the gene expression profile

UMAP showing distribution poly(A) site expression in single cells

Scatter plot showing correlation between gene expression and poly(A) site expression