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GSM3140593

  Basic Information
Experiment GSM3140593 Study GSE114374
Organism Homo sapiens (GRCh38) Tissue Colon
Protocol 10X Sample# 1
Sample Run SRR7159836
Reference Kinchen, J., et al. (2018). Structural Remodeling of the Human Colonic Mesenchyme in Inflammatory Bowel Disease. Cell 175(2): 372-386 e317.
Gene# 17207 Cell# 1910
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 2

  PolyA Site Expression
scAPAtrap
Sierra
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Box plot showing poly(A) site expression in different cell types
5101520Intestinal stem cellColonic stem cell
Intestinal stem cellColonic stem cellPoly(A) site expression
UMAP showing 2D embeddings of celltypes based on the gene expression profile
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Intestinal stem cellColonic stem cellUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
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5101520Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression
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Gene expressionPoly(A) site expression

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