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GSM3040896



  Basic Information
Experiment GSM3040896 Study GSE109774
Organism Mus musculus (mm10) Tissue Kidney
Protocol 10X Sample# 1
Sample Run SRR6835850
Reference Tabula Muris, C., et al. (2018). Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. Nature 562(7727): 367-372.

Gene# 14051 Cell# 907
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 5

  PolyA Site Expression
scAPAtrap
Sierra
Box plot showing poly(A) site expression in different cell types
246810Distal tubule cellsProximal tubule cellT cellVascular endothelial cellCollecting duct principal cell
Distal tubule cellsProximal tubule cellT cellVascular endothelial cellCollecting duct principal cellPoly(A) site expression
UMAP showing 2D embeddings of celltypes based on the gene expression profile
−10−50510−10−5051015
Distal tubule cellsProximal tubule cellT cellVascular endothelial cellCollecting duct principal cellUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−10−50510−10−5051015
246810Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression