HOME/ POLYA SITE/

GSM2438922



  Basic Information
Experiment GSM2438922 Study GSE92865
Organism Mus musculus (mm10) Tissue Small intestine
Protocol 10X Sample# 1
Sample Run SRR5127954
Reference Yan, K. S., et al. (2017). Non-equivalence of Wnt and R-spondin ligands during Lgr5+ intestinal stem-cell self-renewal. Nature 545(7653): 238-242.

Gene# 13010 Cell# 1284
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 2

  PolyA Site Expression
scAPAtrap
Sierra
Box plot showing poly(A) site expression in different cell types
246810Dendritic cellPaneth cell
Dendritic cellPaneth cellPoly(A) site expression
UMAP showing 2D embeddings of celltypes based on the gene expression profile
−5051015−10−505
Dendritic cellPaneth cellUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
−5051015−10−505
2468Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression
22.533.544.52345678910
Gene expressionPoly(A) site expression