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GSM2333586

  Basic Information
Experiment GSM2333586 Study GSE87544
Organism Mus musculus (mm10) Tissue Hypothalamus
Protocol Drop-seq Sample# 1
Sample Run SRR4340032
Reference Chen, R., et al. (2017). Single-Cell RNA-Seq Reveals Hypothalamic Cell Diversity. Cell Reports 18(13): 3227-3241.
Gene# 15891 Cell# 1047
PolyA site# Gene with polyA site#
APA event# Gene with APA event#
Cell types 6

  PolyA Site Expression
scAPAtrap
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Box plot showing poly(A) site expression in different cell types
12345NeuronEndothelial cellQuiescent neural stem cellPericyteMicroglial cellOligodendrocyte
NeuronEndothelial cellQuiescent neural stem cellPericyteMicroglial cellOligodendrocytePoly(A) site expression
UMAP showing 2D embeddings of celltypes based on the gene expression profile
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NeuronEndothelial cellQuiescent neural stem cellPericyteMicroglial cellOligodendrocyteUMAP_1UMAP_2
UMAP showing distribution poly(A) site expression in single cells
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2345Poly(A) site expressionUMAP_1UMAP_2
Scatter plot showing correlation between gene expression and poly(A) site expression

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