PlantAPAdb catalogues all PAC (poly(A) site cluster) datasets, which are well organized by different categories such as sequencing protocols, biological samples, relevant authors and studies, and published year. Each dataset is displayed by a dataset card. By clicking the card of a dataset, users can view detailed statistical information of the dataset, such as the relevant study and literature, mapping information of the raw data, statistics of PAC and read distribution in different genomic regions. More...
Buffer Control (SRP089899)
Arabidopsis thaliana
SRP: SRP089899
Protocol: PAT-seq
Year: 2017
Seedling Control (SRP089899)
Arabidopsis thaliana
SRP: SRP089899
Protocol: PAT-seq
Year: 2017
Cordycepin 2h (SRP089899)
Arabidopsis thaliana
SRP: SRP089899
Protocol: PAT-seq
Year: 2017
FLAG-RPL18 Control (SRP089899)
Arabidopsis thaliana
SRP: SRP089899
Protocol: PAT-seq
Year: 2017
FLAG-RPL18 Hypoxia 2h (SRP089899)
Arabidopsis thaliana
SRP: SRP089899
Protocol: PAT-seq
Year: 2017
Hypoxia 2h (SRP089899)
Arabidopsis thaliana
SRP: SRP089899
Protocol: PAT-seq
Year: 2017
DRS fpa (ERP003245)
Arabidopsis thaliana
SRP: ERP003245
Protocol: DRS
Year: 2013
Seeding Wild Type DRS (ERP003245)
Arabidopsis thaliana
SRP: ERP003245
Protocol: DRS
Year: 2013
Flower (SRP070055)
Arabidopsis thaliana
SRP: SRP070055
Protocol: PAT-seq
Year: 2016
Root (SRP070055)
Arabidopsis thaliana
SRP: SRP070055
Protocol: PAT-seq
Year: 2016
Auxin (SRP092240)
Arabidopsis thaliana
SRP: SRP092240
Protocol: PAT-seq
Year: 2017
Mock Control (SRP092240)
Arabidopsis thaliana
SRP: SRP092240
Protocol: PAT-seq
Year: 2017
Amp311 (SRP093950)
Arabidopsis thaliana
SRP: SRP093950
Protocol: PAT-seq
Year: 2017
Esp5 (SRP093950)
Arabidopsis thaliana
SRP: SRP093950
Protocol: PAT-seq
Year: 2017
CPSF30 (SRP050424)
Arabidopsis thaliana
SRP: SRP050424
Protocol: PAT-seq
Year: 2014
CPSF30m (SRP050424)
Arabidopsis thaliana
SRP: SRP050424
Protocol: PAT-seq
Year: 2014
Root Oxt6 Mutant (SRP050424)
Arabidopsis thaliana
SRP: SRP050424
Protocol: PAT-seq
Year: 2014
Root Wild Type (SRP050424)
Arabidopsis thaliana
SRP: SRP050424
Protocol: PAT-seq
Year: 2014
Leaf slh1 00hr (SRP033221)
Arabidopsis thaliana
SRP: SRP033221
Protocol: EXPRSS
Year: 2014
Leaf slh1 06hr (SRP033221)
Arabidopsis thaliana
SRP: SRP033221
Protocol: EXPRSS
Year: 2014
Leaf slh1 09hr (SRP033221)
Arabidopsis thaliana
SRP: SRP033221
Protocol: EXPRSS
Year: 2014
Leaf slh1 24hr (SRP033221)
Arabidopsis thaliana
SRP: SRP033221
Protocol: EXPRSS
Year: 2014
Leaf Wild Type 00hr (SRP033221)
Arabidopsis thaliana
SRP: SRP033221
Protocol: EXPRSS
Year: 2014
Leaf Wild Type 06hr (SRP033221)
Arabidopsis thaliana
SRP: SRP033221
Protocol: EXPRSS
Year: 2014
Leaf Wild Type 09hr (SRP033221)
Arabidopsis thaliana
SRP: SRP033221
Protocol: EXPRSS
Year: 2014
Leaf Wild Type 24hr (SRP033221)
Arabidopsis thaliana
SRP: SRP033221
Protocol: EXPRSS
Year: 2014
Seeding Wild Type DRS1 (ERP001018)
Arabidopsis thaliana
SRP: ERP001018
Protocol: DRS
Year: 2012
Seeding Wild Type DRS2 (ERP001018)
Arabidopsis thaliana
SRP: ERP001018
Protocol: DRS
Year: 2012
Leaf Oxt6 Mutant (SRP009685)
Arabidopsis thaliana
SRP: SRP009685
Protocol: PAT-seq
Year: 2012
Leaf Wild Type (SRP009685)
Arabidopsis thaliana
SRP: SRP009685
Protocol: PAT-seq
Year: 2012
AHBD2 (SRP005137)
Arabidopsis thaliana
SRP: SRP005137
Protocol: PAT-seq
Year: 2011
Hlp1 Mutant (SRP013996)
Arabidopsis thaliana
SRP: SRP013996
Protocol: PAS-seq
Year: 2015
Seedling Wild Type Control (SRP013996)
Arabidopsis thaliana
SRP: SRP013996
Protocol: PAS-seq
Year: 2015
Fip1 Mutant (SRP187778)
Arabidopsis thaliana
SRP: SRP187778
Protocol: PAT-seq
Year: 2019
Salt-treated Fip1 Mutant (SRP187778)
Arabidopsis thaliana
SRP: SRP187778
Protocol: PAT-seq
Year: 2019
Wild Type Control (SRP187778)
Arabidopsis thaliana
SRP: SRP187778
Protocol: PAT-seq
Year: 2019
Salt-treated Wild Type (SRP187778)
Arabidopsis thaliana
SRP: SRP187778
Protocol: PAT-seq
Year: 2019
Latera Bud (SRP093919)
Phyllostachys edulis
SRP: SRP093919
Protocol: PAS-seq
Year: 2018
New Shoot Tip (SRP093919)
Phyllostachys edulis
SRP: SRP093919
Protocol: PAS-seq
Year: 2018
Rhizome Tip (SRP093919)
Phyllostachys edulis
SRP: SRP093919
Protocol: PAS-seq
Year: 2018
High Salt Acetate (SRP068667)
Chlamydomonas reinhardtii
SRP: SRP068667
Protocol: PAT-seq
Year: 2016
High Salt (SRP068667)
Chlamydomonas reinhardtii
SRP: SRP068667
Protocol: PAT-seq
Year: 2016
Tris Phosphate Acetate (SRP068667)
Chlamydomonas reinhardtii
SRP: SRP068667
Protocol: PAT-seq
Year: 2016
Tris Phosphate (SRP068667)
Chlamydomonas reinhardtii
SRP: SRP068667
Protocol: PAT-seq
Year: 2016
AHBG3 Test1 (SRP041219)
Medicago truncatula
SRP: SRP041219
Protocol: PAT-seq
Year: 2014
AHBG3 Test2 (SRP041219)
Medicago truncatula
SRP: SRP041219
Protocol: PAT-seq
Year: 2014
20 Days Leaf (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
5 Days Root (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
60 Days Leaf (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
60 Days Root (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
60 Days Stem (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
Anther (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
Dry Seed (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
Embryo (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
Endosperm (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
Husk (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
Imbibed Seed (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
Mature Pollen (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
Pistil (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
Seeding Shoot (SRP136202)
Oryza sativa Indica Group
SRP: SRP136202
Protocol: PAT-seq
Year: 2019
20 Days Leaf (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
5 Days Root (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
60 Days Leaf (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
60 Days Root (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
60 Days Stem (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
Anther (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
Dry Seed (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
Embryo (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
Endosperm (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
Husk (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
Imbibed Seed (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
Mature Pollen (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
Pistil (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016
Seedling Shoot (SRP073467)
Oryza sativa Japonica Group
SRP: SRP073467
Protocol: PAT-seq
Year: 2016