# DREME 5.3.3 # command: dreme -oc ./motif -p ./fasta/posSeq.fa -k 6 -rna # positives: 238 from ./fasta/posSeq.fa (Sat Jun 12 20:51:54 CST 2021) # negatives: 238 from shuffled positives # host: ubuntu-Super-Server # when: Sun Jun 13 19:55:46 CST 2021 MEME version 5.3.3 ALPHABET "RNA" RNA-LIKE A "Adenine" CC0000 C "Cytosine" 0000CC G "Guanine" FFB300 U "Uracil" 008000 N "Any base" = ACGU X = ACGU . = ACGU V "Not U" = ACG H "Not G" = ACU D "Not C" = AGU B "Not A" = CGU M "Amino" = AC R "Purine" = AG W "Weak" = AU S "Strong" = CG Y "Pyrimidine" = CU K "Keto" = GU T = U END ALPHABET Background letter frequencies (from dataset): A 0.305 C 0.133 G 0.157 U 0.405 # Stopping reason: E-value threshold exceeded # Running time: 0.58 seconds